DNA Binding Motif
| Accessions: | MA0992.2 (JASPAR 2024) |
| Names: | ERF4 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 12 |
| Consensus: | kcCGCCGyCAyh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 227 109 368 319 k 02 88 644 165 126 c 03 11 1005 2 5 C 04 24 1 979 19 G 05 5 992 9 17 C 06 5 1015 2 1 C 07 9 0 1006 8 G 08 34 349 13 627 y 09 42 900 25 56 C 10 827 19 91 86 A 11 253 306 101 363 y 12 318 287 113 305 h |
| Type: | Heterodimer |
| Binding TFs: | O80340 (AP2 domain) O80340 |
| Binding Sites: | MA0992.2.1 / MA0992.2.12 / MA0992.2.19 MA0992.2.10 MA0992.2.11 MA0992.2.12 MA0992.2.13 / MA0992.2.7 MA0992.2.14 / MA0992.2.8 MA0992.2.15 MA0992.2.16 / MA0992.2.9 MA0992.2.17 MA0992.2.10 / MA0992.2.18 MA0992.2.2 MA0992.2.20 MA0992.2.3 MA0992.2.4 MA0992.2.5 MA0992.2.4 / MA0992.2.6 MA0992.2.5 / MA0992.2.7 MA0992.2.6 / MA0992.2.8 MA0992.2.9 MA0992.2.11 MA0992.2.13 MA0992.2.14 MA0992.2.15 / MA0992.2.17 MA0992.2.16 MA0992.2.18 MA0992.2.19 MA0992.2.20 |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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