DNA Binding Motif

						

			
Accessions: MA0328.2 (JASPAR 2024)

			
Names: MATALPHA2
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae S288c
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: CrTGTAaw
Weblogo: 
PSSM: P0      A      C      G      T
01      0    815      0    184      C
02    455      0    535     10      r
03      0     62      0    938      T
04     26      0    973      0      G
05      0      0      0   1000      T
06    910      0      9     80      A
07    639     72     41    247      a
08    394     28      0    577      w
Type: Heterodimer
Binding TFs: P0CY08 (Homeobox domain, Homeobox KN domain)
P0CY08
			
Publications: Jin Y, Zhong H, Vershon AK. The yeast a1 and alpha2 homeodomain proteins do not contribute equally to heterodimeric DNA binding. Mol Cell Biol 19:585-93 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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