DNA Binding Motif

						

			
Accessions: 1ckt_A (3D-footprint 20231221)

			
Names: HIGH MOBILITY GROUP 1 PROTEIN
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEX
Length: 4
Consensus: gtCC
Weblogo: 
PSSM: P0      A      C      G      T
01     19     19     39     19      g
02     13     13     13     57      t
03      0     96      0      0      C
04      0     96      0      0      C
Binding TFs: 1ckt_A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
Binding Sites: 1ckt_C
1ckt_B
			
Publications: Ohndorf U.M, Rould M.A, He Q, Pabo C.O, Lippard S.J. Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins. Nature 399:708-12 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.