DNA Binding Motif

						

			
Accessions: 2ff0_A (3D-footprint 20231221)

			
Names: Steroidogenic factor 1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
Length: 9
Consensus: TGgCCCtGA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      0      0     84     12      G
03     12     12     60     12      g
04      0     96      0      0      C
05      0     96      0      0      C
06      0     96      0      0      C
07     12     12     12     60      t
08      0      0     96      0      G
09     96      0      0      0      A
Binding TFs: 2ff0_A (Zinc finger, C4 type (two domains))
Binding Sites: 2ff0_B
2ff0_C
			
Publications: Little T.H, Zhang Y, Matulis C.K, Weck J, Zhang Z, Ramachandran A, Mayo K.E, Radhakrishnan I. Sequence-specific deoxyribonucleic acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability. Molecular endocrinology (Baltimore, Md.) 20:831-43 (2006). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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