DNA Binding Motif

						

			
Accessions: 5w43_B (3D-footprint 2022-04-03)

			
Names: Transcriptional regulatory protein RcsB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the two-component response regulator RcsB-DNA complex
Length: 5
Consensus: taAGA
Weblogo: 
PSSM: P0      A      C      G      T
01     12     10     10     64      t
02     64     10     10     12      a
03     85     11      0      0      A
04      0      0     96      0      G
05     85     10      0      1      A
Binding TFs: 5w43_B (Response regulator receiver domain, Bacterial regulatory proteins, luxR family, Sigma-70, region 4)
Binding Sites: 5w43_E
5w43_F
			
Publications: Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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