DNA Binding Motif

Accessions: 5w43_B (3D-footprint 2022-04-03)
Names: Transcriptional regulatory protein RcsB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the two-component response regulator RcsB-DNA complex
Length: 5
Consensus: taAGA
Weblogo:
PSSM: P0 A C G T
01 12 10 10 64 t
02 64 10 10 12 a
03 85 11 0 0 A
04 0 0 96 0 G
05 85 10 0 1 A
Binding TFs: 5w43_B (Response regulator receiver domain, Bacterial regulatory proteins, luxR family, Sigma-70, region 4)
Binding Sites: 5w43_E
5w43_F
Publications: Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed]

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