DNA Binding Motif

Accessions: 1cf7_A (3D-footprint 20210203)
Names: PROTEIN (TRANSCRIPTION FACTOR E2F-4)
Organisms: Homo sapiens
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
Length: 8
Consensus: tTcGCGCG
Weblogo:
PSSM: P0 A C G T
01 12 12 12 60 t
02 0 6 0 90 T
03 12 60 12 12 c
04 12 12 66 6 G
05 0 90 6 0 C
06 0 0 96 0 G
07 0 96 0 0 C
08 0 0 96 0 G
Binding TFs: 1cf7_A (E2F/DP family winged-helix DNA-binding domain)
Binding Sites: 1cf7_C
1cf7_D
Publications: Zheng N., Fraenkel E., Pabo C. O., Pavletich N. P. Structural basis of DNA recognition by the heterodimeric cell cycle transcription factor E2F-DP. Genes Dev. 13:666-674 (1999). [Pubmed]

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