DNA Binding Motif
| Accessions: | MF0005.1 (JASPAR 2024) |
| Names: | Forkhead class |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | METAMODEL |
| Length: | 9 |
| Consensus: | TGTTTAytt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3.060 2.420 0 94.520 T 02 24.600 0 74.290 1.110 G 03 0 1.790 0.770 97.440 T 04 0.350 1.030 0 98.630 T 05 1.350 0 8.650 90 T 06 76.100 0 20.650 3.250 A 07 2.220 40.680 6.370 50.730 y 08 16.920 10.320 22.620 50.140 t 09 6.650 20.280 11.580 61.490 t |
| Publications: | Sandelin A, Wasserman W.W. Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics. Journal of molecular biology 338:207-15 (2004). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.