DNA Binding Motif

						

			
Accessions: MA0505.1 (JASPAR 2024)

			
Names: Nr5a2
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: ragtTCAAGGyCAgs
Weblogo: 
PSSM: P0      A      C      G      T
01    645    224    634    199      r
02    985    170    336    211      a
03    276    198    990    238      g
04    122    378    366    836      t
05     71    351     23   1257      T
06      8   1616     74      4      C
07   1685     14      0      3      A
08   1679      0     23      0      A
09     39      0   1663      0      G
10      0      0   1702      0      G
11    169    584     61    888      y
12      0   1568     12    122      C
13   1437     20     90    155      A
14    271    345    740    346      g
15    249    693    454    306      s
Type: Heterodimer
Binding TFs: P45448 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P45448
Binding Sites: MA0505.1.1
MA0505.1.10
MA0505.1.11
MA0505.1.12
MA0505.1.13
MA0505.1.14
MA0505.1.15
MA0505.1.16
MA0505.1.17
MA0505.1.18 / MA0505.1.19
MA0505.1.2
MA0505.1.20
MA0505.1.3
MA0505.1.4
MA0505.1.5
MA0505.1.6
MA0505.1.7
MA0505.1.8
MA0505.1.9
			
Publications: Fayard E., Schoonjans K., Annicotte J. S., Auwerx J. Liver receptor homolog 1 controls the expression of carboxyl ester lipase.. J. Biol. Chem. 278:35725-35731 (2003). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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