DNA Binding Motif

Accessions: scrt_SOLEXA_2.5_2_FBgn0004880 (FlyZincFinger 1.0 )
Names: CG1130
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0 1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 13
Consensus: rcCACCTGTTGma
Weblogo:
PSSM: P0 A C G T
01 122 59 67 13 r
02 61 184 33 20 c
03 23 263 11 24 C
04 317 0 3 1 A
05 0 319 0 2 C
06 0 307 0 14 C
07 1 2 4 314 T
08 0 0 317 4 G
09 3 0 0 318 T
10 28 1 34 258 T
11 36 3 275 7 G
12 123 142 22 34 m
13 123 55 73 70 a
Binding TFs: scrt (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

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