DNA Binding Motif
Accessions: | GadE (RegulonDB 7.5) |
Names: | GadE, GadE DNA-binding transcriptional activator |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 18 |
Consensus: | TstAwATAryAAAmaccw |
Weblogo: | |
PSSM: | P0 A C G T 01 0 0 0 5 T 02 0 2 2 1 s 03 1 0 1 3 t 04 5 0 0 0 A 05 3 0 0 2 w 06 4 0 0 1 A 07 0 0 0 5 T 08 5 0 0 0 A 09 3 0 2 0 r 10 0 2 0 3 y 11 4 0 1 0 A 12 5 0 0 0 A 13 5 0 0 0 A 14 3 2 0 0 m 15 3 0 1 1 a 16 1 2 1 1 c 17 1 2 1 1 c 18 2 0 0 3 w |
Binding TFs: | ECK120005974 (Bacterial regulatory proteins, luxR family) |
Binding Sites: | ECK120012094 ECK120012306 ECK120012308 ECK120012310 ECK120015676 ECK125109421 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.