DNA Binding Motif

						

			
Accessions: MA0145.1 (JASPAR 2024)

			
Names: Tcfcp2l1, Tfcp2l1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: CCrGyyyrarCCrG
Weblogo: 
PSSM: P0      A      C      G      T
01      8   3763    255     40      C
02    285   3289     22    477      C
03   2425     21   1125    508      r
04     24     97   3945     13      G
05    717   1374    105   1890      y
06    402   1182    254   2248      y
07    711   1624    618   1135      y
08   1461    920   1032    677      r
09   2583    285    781    441      a
10   1612    210   1269    996      r
11     15   3815    224     34      C
12    252   3316     12    503      C
13   2187     30   1247    612      r
14     49    118   3886     17      G
Type: Heterodimer
Binding TFs: Q3UNW5 (CP2 transcription factor)
Q3UNW5
Binding Sites: MA0145.1.1
MA0145.1.10
MA0145.1.11
MA0145.1.12
MA0145.1.13
MA0145.1.14
MA0145.1.15
MA0145.1.16
MA0145.1.17
MA0145.1.18
MA0145.1.19
MA0145.1.2
MA0145.1.20
MA0145.1.3
MA0145.1.4
MA0145.1.5
MA0145.1.6
MA0145.1.7
MA0145.1.8
MA0145.1.9
			
Publications: Chen X, Xu H, Yuan P, Fang F, Huss M, Vega V.B, Wong E, Orlov Y.L, Zhang W, Jiang J, Loh Y.H, Yeo H.C, Yeo Z.X, Narang V, Govindarajan K.R, Leong B, Shahab A, Ruan Y, Bourque G, Sung W.K, Clarke N.D, Wei C.L, Ng H.H. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133:1106-17 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.