DNA Binding Motif

						

			
Accessions: BARHL2_DBD_2 (HumanTF 1.0)

			
Names: BARHL2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 10
Consensus: syTAAwtGcy
Weblogo: 
PSSM: P0      A      C      G      T
01    979   1178   1441    940      s
02    860   1423    788   1467      y
03    352     54      0   4538      T
04   4538      0    123     76      A
05   4538      0      0      0      A
06   2385    218    949   4538      w
07    954   1376   1045   4538      t
08   1118      0   4538    365      G
09    905   1659   1070    904      c
10    887   1174    826   1652      y
Binding TFs: BARHL2_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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