DNA Binding Motif

Accessions: MA1151.1 (JASPAR 2024)
Names: RORC
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SMiLE-seq
Length: 12
Consensus: dwAwgTrGGtCA
Weblogo:
PSSM: P0 A C G T
01 306 179 260 255 d
02 329 114 141 416 w
03 855 14 11 120 A
04 527 10 32 431 w
05 225 249 277 249 g
06 43 87 116 753 T
07 623 24 343 11 r
08 5 2 919 74 G
09 36 3 952 8 G
10 59 112 168 661 t
11 6 822 19 153 C
12 785 12 161 42 A
Type: Heterodimer
Binding TFs: P51449 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P51449
Publications: Zhang Y, Luo XY, Wu DH, Xu Y. ROR nuclear receptors: structures, related diseases, and drug discovery. Acta Pharmacol Sin 36:71-87 (2015). [Pubmed]

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