DNA Binding Motif

Accessions: MA1088.1 (JASPAR 2024)
Names: WRKY48
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: rdrGTCaamg
Weblogo:
PSSM: P0 A C G T
01 262 237 265 235 r
02 263 231 252 255 d
03 326 154 410 111 r
04 21 0 869 110 G
05 21 0 0 978 T
06 63 930 1 6 C
07 662 145 66 127 a
08 538 76 228 159 a
09 269 386 155 190 m
10 234 232 313 221 g
Type: Heterodimer
Binding TFs: Q9FGZ4 (WRKY DNA -binding domain)
Q9FGZ4
Publications: Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

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