DNA Binding Motif

Accessions: 5no6_BI (3D-footprint 20231221)
Names: Homeobox protein Hox-B13
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TEAD4-HOXB13 complex bound to DNA
Length: 12
Consensus: GAATGynATAAm
Weblogo:
PSSM: P0 A C G T
01 0 0 94 2 G
02 96 0 0 0 A
03 96 0 0 0 A
04 5 14 5 72 T
05 5 5 80 6 G
06 4 32 2 58 y
07 24 24 24 24 n
08 93 0 1 2 A
09 0 2 0 94 T
10 88 2 2 4 A
11 74 2 7 13 A
12 34 58 2 2 m
Type: Heterodimer
Binding TFs: 5no6_B (Homeobox domain)
5no6_I (TEA/ATTS domain family)
Binding Sites: 5no6_D
5no6_E

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