DNA Binding Motif

						

			
Accessions: h (DrosophilaTF 1.1)

			
Names: h
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 14
Consensus: svggCACGCGmcak
Weblogo: 
PSSM: P0      A      C      G      T
01    0.2    0.3   0.35   0.15      s
02 0.2626  0.303 0.2626 0.1717      v
03   0.12   0.16   0.56   0.16      g
04   0.19   0.15   0.58   0.08      g
05      0   0.96      0   0.04      C
06  0.802 0.1188      0 0.0792      A
07      0      1      0      0      C
08 0.0303      0 0.9394 0.0303      G
09      0   0.83   0.07    0.1      C
10      0   0.12   0.71   0.17      G
11   0.36   0.41   0.18   0.05      m
12 0.0495 0.6139 0.2376  0.099      c
13   0.47   0.21   0.11   0.21      a
14 0.1515 0.1515 0.3131 0.3838      k
Binding TFs: h (Helix-loop-helix DNA-binding domain, Hairy Orange)
Binding Sites: h_12a
h_12b
h_2
h_2-10
h_2-11
h_2-15
h_2-17
h_2-18
h_2-2
h_2-23
h_2-31
h_2-33
h_2-4
h_2-5
h_2-7
h_2-8
h_23
h_34
h_36
h_39
h_4
h_47
h_5
h_6
h_8
h_9
			
Publications: van Doren M., Bailey A. M., Esnayra J., Ede K., Posakony J. W. Negative regulation of proneural gene activity: hairy is a direct transcriptional repressor of achaete. Genes Dev. 8:2729-2742 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.