DNA Binding Motif

						

			
Accessions: MA0035.2 (JASPAR 2024)

			
Names: Gata1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: rsWGATAAgrr
Weblogo: 
PSSM: P0      A      C      G      T
01   1423    560   1242    775      r
02    708   1633   1235    424      s
03   2782     31     10   1177      W
04      0      0   4000      0      G
05   4000      0      0      0      A
06     27     29    109   3835      T
07   3887      0      6    107      A
08   3550      4    383     63      A
09    799    681   2296    224      g
10   1432    897   1360    311      r
11   1487    829   1099    585      r
Type: Heterodimer
Binding TFs: P17679 (GATA zinc finger)
P17679
			
Publications: Merika M., Orkin S. H. DNA-binding specificity of GATA family transcription factors. Mol. Cell. Biol. 13:3999-4010 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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