DNA Binding Motif

Accessions: 4wzs_D (3D-footprint 20210203)
Names: ECU04_1440 protein
Organisms: Encephalitozoon cuniculi (strain GB-M1), Microsporidian parasite
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the Mot1 N-terminal domain in complex with TBP and NC2 bound to a promoter DNA fragment
Length: 9
Consensus: CTTTTATAG
Weblogo:
PSSM: P0 A C G T
01 7 73 9 7 C
02 0 0 0 96 T
03 7 9 7 73 T
04 0 0 0 96 T
05 0 0 0 96 T
06 73 9 7 7 A
07 0 0 0 96 T
08 96 0 0 0 A
09 7 9 73 7 G
Binding TFs: 4wzs_D (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 4wzs_E
4wzs_F
Publications: Butryn A, Schuller JM, Stoehr G, Runge-Wollmann P, Förster F, Auble DT, Hopfner KP. Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1. Elife : (2015). [Pubmed]

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