DNA Binding Motif

						

			
Accessions: 4wzs_D (3D-footprint 20231221)

			
Names: ECU04_1440 protein
Organisms: Encephalitozoon cuniculi (strain GB-M1), Microsporidian parasite
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the Mot1 N-terminal domain in complex with TBP and NC2 bound to a promoter DNA fragment
Length: 9
Consensus: CTTTTATAG
Weblogo: 
PSSM: P0      A      C      G      T
01      7     73      9      7      C
02      0      0      0     96      T
03      7      9      7     73      T
04      0      0      0     96      T
05      0      0      0     96      T
06     73      9      7      7      A
07      0      0      0     96      T
08     96      0      0      0      A
09      7      9     73      7      G
Binding TFs: 4wzs_D (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 4wzs_E
4wzs_F
			
Publications: Butryn A, Schuller JM, Stoehr G, Runge-Wollmann P, Förster F, Auble DT, Hopfner KP. Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1. Elife : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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