DNA Binding Motif

						

			
Accessions: jim_F1-9_SOLEXA_2.5_FBgn0027339 (FlyZincFinger 1.0 )

			
Names: CG11352
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: rmAAaAAAAmmammm
Weblogo: 
PSSM: P0      A      C      G      T
01    202     60    102     25      r
02    124    190     43     50      m
03    372     26      6     19      A
04    414      6      0      3      A
05    259    104      0     60      a
06    411      1      4      7      A
07    369     52      2      0      A
08    349      5     64      5      A
09    412      0     11      0      A
10    159    222     40      2      m
11    154    122     74     73      m
12    240     55     74     54      a
13    204    143     36     40      m
14    181    130     44     45      m
15    122    114     82     42      m
Binding TFs: jim (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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