DNA Binding Motif

						

			
Accessions: LevR (DBTBS 1.0)

			
Names: LevR
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 11
Consensus: ACsTGTWTyAA
Weblogo: 
PSSM: P0      A      C      G      T
01      1      0      0      0      A
02   0.21   0.79      0      0      C
03      0   0.66   0.34      0      s
04      0      0      0      1      T
05      0      0      1      0      G
06      0      0      0      1      T
07   0.69      0      0   0.31      W
08      0      0      0      1      T
09      0   0.47      0   0.53      y
10      1      0      0      0      A
11      1      0      0      0      A
Binding TFs: LevR (ATPase family associated with various cellular activities (AAA), Sigma-54 interaction domain, PRD domain, Magnesium chelatase, subunit ChlI, PTS system fructose IIA component, AAA domain (Cdc48 subfamily), AAA domain (dynein-related subfamily))
Binding Sites: levD_2
levD_3
			
Publications: Débarbouillé M, Martin-Verstraete I, Klier A, Rapoport G. The transcriptional regulator LevR of Bacillus subtilis has domains homologous to both sigma 54- and phosphotransferase system-dependent regulators. Proceedings of the National Academy of Sciences of the United States of America 88:2212-6 (1991). [Pubmed]


Martin-Verstraete I, Débarbouillé M, Klier A, Rapoport G. Interactions of wild-type and truncated LevR of Bacillus subtilis with the upstream activating sequence of the levanase operon. Journal of molecular biology 241:178-92 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.