DNA Binding Motif

						

			
Accessions: M0217 (AthalianaCistrome v4_May2016)

			
Names: ABF2.DAP, T06956;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: dawwwTGMCACGTswccw
Weblogo: 
PSSM: P0      A      C      G      T
01    207     79    157    152      d
02    278     80     96    141      a
03    265     43     78    209      w
04    237     85     80    193      w
05    184    138    110    163      w
06     25     84     54    432      T
07      1      0    567     27      G
08    174    421      0      0      M
09      0    595      0      0      C
10    594      0      0      1      A
11      0    595      0      0      C
12      0      0    595      0      G
13      0      0      0    595      T
14     20    252    323      0      s
15    262      0     92    241      w
16     43    305    104    143      c
17    130    380     29     56      c
18    281     94     40    180      w
Binding TFs: T06956 (Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.