DNA Binding Motif

Accessions: MA1042.1 (JASPAR 2024)
Names: MYB59
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: rTTAGGTm
Weblogo:
PSSM: P0 A C G T
01 357 14 548 80 r
02 17 7 114 862 T
03 31 14 6 949 T
04 874 39 17 71 A
05 17 8 956 19 G
06 24 11 948 18 G
07 39 40 5 916 T
08 552 267 23 158 m
Type: Heterodimer
Binding TFs: Q4JL84 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q4JL84
Publications: Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). [Pubmed]

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