DNA Binding Motif

Accessions: MA1126.1 (JASPAR 2018)
Names: FOS::JUN(var.2)
Organisms: Homo sapiens
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Notes: SMiLE-seq
Length: 16
Consensus: drTgACGTCAtmmkty
Weblogo:
PSSM: P0 A C G T
01 266 63 419 252 d
02 556 45 369 30 r
03 47 74 62 816 T
04 42 112 655 191 g
05 748 31 135 86 A
06 80 838 41 41 C
07 131 114 722 34 G
08 40 23 32 905 T
09 53 846 44 57 C
10 907 24 36 33 A
11 30 234 60 676 t
12 299 322 160 220 m
13 322 313 161 204 m
14 190 178 261 371 k
15 161 75 238 526 t
16 203 291 207 298 y
Binding TFs: P05412 (Jun-like transcription factor, bZIP transcription factor, Basic region leucine zipper)
Publications: Shaulian E, Karin M. AP-1 as a regulator of cell life and death. Nat Cell Biol : (2002). [Pubmed]

Disclaimer

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