DNA Binding Motif
| Accessions: | dsx (DrosophilaTF 1.1) |
| Names: | dsx |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] |
| Length: | 17 |
| Consensus: | byrmyACAATGTwdywy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.087 0.2609 0.3913 0.2609 b 02 0.1304 0.2609 0.1304 0.4783 y 03 0.48 0.08 0.44 0 r 04 0.4231 0.2692 0.1154 0.1923 m 05 0.1481 0.3333 0.2222 0.2963 y 06 1 0 0 0 A 07 0.0303 0.8788 0.0303 0.0606 C 08 0.8788 0 0 0.1212 A 09 1 0 0 0 A 10 0.1818 0 0.0303 0.7879 T 11 0.0303 0.0606 0.8485 0.0606 G 12 0 0.0312 0 0.9688 T 13 0.4516 0.0968 0.1935 0.2581 w 14 0.2667 0.1 0.2667 0.3667 d 15 0 0.5185 0.2222 0.2593 y 16 0.2692 0.1923 0.2308 0.3077 w 17 0.1923 0.2692 0.2308 0.3077 y |
| Binding TFs: | dsx (DM DNA binding domain, Doublesex dimerisation domain) |
| Binding Sites: | dsx_1 dsx_10 dsx_15 dsx_16 dsx_19 dsx_25 dsx_26 dsx_27 dsx_28 dsx_30 dsx_31 dsx_32 dsx_35 dsx_37 dsx_39 dsx_40 dsx_42 dsx_43 dsx_44 dsx_45 dsx_47 dsx_49 dsx_5 dsx_50 dsx_51 dsx_54 dsx_55 dsx_57 dsx_58 dsx_59 dsx_6 dsx_61 dsx_9 |
| Publications: | Erdman S.E, Chen H.J, Burtis K.C. Functional and genetic characterization of the oligomerization and DNA binding properties of the Drosophila doublesex proteins. Genetics 144:1639-52 (1996). [Pubmed] |
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