DNA Binding Motif

Accessions: 5fur_ACGI (3D-footprint 20210203)
Names: TATA-BOX-BINDING PROTEIN
Organisms: Homo sapiens
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of human TFIID-IIA bound to core promoter DNA
Length: 8
Consensus: CTTTTATA
Weblogo:
PSSM: P0 A C G T
01 9 75 6 6 C
02 0 0 0 96 T
03 6 9 6 75 T
04 6 9 6 75 T
05 6 0 1 89 T
06 75 9 6 6 A
07 0 0 0 96 T
08 96 0 0 0 A
Binding TFs: 5fur_A (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 5fur_E
5fur_F
Publications: Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature 531:604-9 (2016). [Pubmed]

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