DNA Binding Motif

Accessions: 5ybd_A (3D-footprint 20231221)
Names: Transcriptional regulator ERG
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: X-ray structure of ETS domain of Ergp55 in complex with E74DNA
Length: 5
Consensus: tTCCg
Weblogo:
PSSM: P0 A C G T
01 13 13 13 57 t
02 0 0 0 96 T
03 0 96 0 0 C
04 0 96 0 0 C
05 13 16 54 13 g
Binding TFs: 5ybd_A (Ets-domain)
Binding Sites: 5ybd_B
5ybd_C
Publications: Sharma R, Gangwar SP, Saxena AK. Comparative structure analysis of the ETSi domain of ERG3 and its complex with the E74 promoter DNA sequence. Acta Crystallogr F Struct Biol Commun : (2018). [Pubmed]

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