DNA Binding Motif

Accessions: ASCL2_methyl_1 (HT-SELEX2 May2017)
Names: ASCL2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rrCAGCTGyy
Weblogo:
PSSM: P0 A C G T
01 2168 827 1716 842 r
02 2123 753 3431 208 r
03 0 5553 0 0 C
04 5553 17 98 191 A
05 31 976 5553 1187 G
06 1216 5553 924 15 C
07 224 38 80 5553 T
08 69 32 5553 0 G
09 215 3428 810 2125 y
10 774 1685 786 2308 y
Binding TFs: ASCL2 (Helix-loop-helix DNA-binding domain)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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