DNA Binding Motif

Accessions: 2fio_A (3D-footprint 20231221)
Names: Late genes activator
Organisms: Bacillus phage phi29
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Phage phi29 transcription regulator p4-DNA complex
Length: 5
Consensus: TGTtg
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 0 0 96 0 G
03 0 0 0 96 T
04 13 13 16 54 t
05 13 13 57 13 g
Binding TFs: 2fio_A (Phi-29-like late genes activator (early protein GP4))
Binding Sites: 2fio_C
2fio_D
Publications: Badia D, Camacho A, Pérez-Lago L, Escandón C, Salas M, Coll M. The structure of phage phi29 transcription regulator p4-DNA complex reveals an N-hook motif for DNA. Molecular cell 22:73-81 (2006). [Pubmed]

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