DNA Binding Motif

						

			
Accessions: BARHL2_DBD_3 (HumanTF 1.0)

			
Names: BARHL2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 16
Consensus: TAAwyGsysyTAAwyg
Weblogo: 
PSSM: P0      A      C      G      T
01    276     74     16   3235      T
02   3235     12     65    280      A
03   3235     11     18     15      A
04   1542    110    427   1693      w
05    458   1314    376   1921      y
06    719    154   3235    464      G
07    669    872    893    801      s
08    480    936    441   1378      y
09    670    899   1128    538      s
10    643   1034    441   1118      y
11    297     82     25   3235      T
12   3235     14     67    433      A
13   3235      8     10     27      A
14   1644     77    439   1591      w
15    363   1374    325   1861      y
16    900    145   3235    525      g
Binding TFs: BARHL2_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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