DNA Binding Motif

						

			
Accessions: SA0001.1 (JASPAR 2024)

			
Names: at_AC_acceptor
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 20
Consensus: yyyyyyyyyyyyyyyAGrtw
Weblogo: 
PSSM: P0      A      C      G      T
01  10561  18956   9777  31500      y
02   9690  18907   9552  32645      y
03   8978  19614   9076  33126      y
04   8163  19447   8685  34499      y
05   7470  19246   8295  35783      y
06   6736  19301   7454  37303      y
07   6218  18138   7277  39161      y
08   6281  19520   7669  37324      y
09   7189  20437   8063  35105      y
10   7841  22549   7381  33023      y
11   8272  23287   6449  32786      y
12   6225  23815   4550  36204      y
13   6463  20443   4464  39424      y
14  17046  19025  14183  20540      y
15   4235  44803    144  21612      y
16  70794      0      0      0      A
17      0      0  70794      0      G
18  18462  10023  34299   8010      r
19  17439  13338  13564  26453      t
20  18839  16237  16353  19365      w
			
Publications: Chong A, Zhang G, Bajic V.B. Information for the Coordinates of Exons (ICE): a human splice sites database. Genomics 84:762-6 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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