DNA Binding Motif

Accessions: JUNB_2 (SMILE-seq 1.0)
Names: JUNB
Organisms: Homo sapiens
Libraries: SMILE-seq 1.0 1
1 Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]
Length: 10
Consensus: rTkACGTmAy
Weblogo:
PSSM: P0 A C G T
01 0.528 0.102 0.274 0.096 r
02 0.043 0.025 0.036 0.896 T
03 0.031 0.069 0.608 0.291 k
04 0.85 0.02 0.066 0.064 A
05 0.03 0.825 0.061 0.084 C
06 0.083 0.058 0.828 0.032 G
07 0.062 0.063 0.023 0.852 T
08 0.29 0.605 0.072 0.033 m
09 0.894 0.033 0.029 0.045 A
10 0.095 0.271 0.105 0.53 y
Binding TFs: JUNB (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
Publications: Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]

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