DNA Binding Motif

Accessions: 1nwq_C (3D-footprint 20231221)
Names: CCAAT/enhancer binding protein alpha
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX
Length: 4
Consensus: TTGC
Weblogo:
PSSM: P0 A C G T
01 7 6 6 77 T
02 3 9 1 83 T
03 5 6 75 10 G
04 5 80 7 4 C
Binding TFs: 1nwq_C (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 1nwq_B
1nwq_D
Publications: Miller M, Shuman J.D, Sebastian T, Dauter Z, Johnson P.F. Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer-binding protein alpha. The Journal of biological chemistry 278:15178-84 (2003). [Pubmed]

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