DNA Binding Motif

						

			
Accessions: AscG (RegulonDB 7.5)

			
Names: AscG, AscG DNA-binding transcriptional repressor
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 13
Consensus: kywrTGAAACvdk
Weblogo: 
PSSM: P0      A      C      G      T
01      1      0      2      4      k
02      0      3      1      3      y
03      2      1      1      3      w
04      2      1      3      1      r
05      0      0      0      7      T
06      0      0      7      0      G
07      6      1      0      0      A
08      7      0      0      0      A
09      7      0      0      0      A
10      0      7      0      0      C
11      3      2      2      0      v
12      2      1      2      2      d
13      0      0      4      3      k
Binding TFs: ECK120004559 (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Sites: ECK120026357
ECK120051466
ECK120051470
ECK120051472
ECK120051474
ECK120051476
ECK120051478
			
	
			


			

				

				
				
				
				

			

			

		

	
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