DNA Binding Motif

						

			
Accessions: M0277 (AthalianaCistrome v4_May2016)

			
Names: Adof1.ampDAP, T02414;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: araaaasAAAAAGtwaawwwh
Weblogo: 
PSSM: P0      A      C      G      T
01    314     50    100    127      a
02    249     75    153    114      r
03    320     79     97     95      a
04    315     55    112    109      a
05    266     71    125    129      a
06    228     99    119    145      a
07    133    172    187     99      s
08    477     34     51     29      A
09    457     22      6    106      A
10    591      0      0      0      A
11    591      0      0      0      A
12    585      0      6      0      A
13      0      0    591      0      G
14      8    133     77    373      t
15    324     44     64    159      w
16    380     28    135     48      a
17    296    106     94     95      a
18    271     93     76    151      w
19    221     66    143    161      w
20    238    111     94    148      w
21    185    150     81    175      h
Binding TFs: T02414 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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