DNA Binding Motif

						

			
Accessions: IscR (RegulonDB 7.5)

			
Names: IscR, IscR DNA-binding transcriptional dual regulator
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 22
Consensus: wAwmCCCwdswAAhdbrrKsrw
Weblogo: 
PSSM: P0      A      C      G      T
01      4      1      0      6      w
02     10      1      0      0      A
03      4      1      1      5      w
04      6      4      0      1      m
05      2      8      0      1      C
06      2      9      0      0      C
07      2      8      0      1      C
08      3      1      2      5      w
09      4      0      4      3      d
10      1      5      5      0      s
11      5      0      0      6      w
12      9      0      1      1      A
13      8      0      1      2      A
14      3      3      2      3      h
15      3      0      3      5      d
16      0      3      3      5      b
17      6      0      4      1      r
18      3      0      6      2      r
19      0      0      3      8      K
20      0      5      5      1      s
21      7      0      4      0      r
22      7      1      0      3      w
Binding TFs: ECK120008346 (Transcriptional regulator)
Binding Sites: ECK120017137
ECK120020692
ECK120020694
ECK120020696
ECK120020698
ECK120020700
ECK120020702
ECK120020704
ECK120033121
ECK120033123
ECK125109307
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.