DNA Binding Motif

Accessions: CART1_DBD (HumanTF 1.0)
Names: CART1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 13
Consensus: hTAAyyyAATTAr
Weblogo:
PSSM: P0 A C G T
01 1181 1195 975 1316 h
02 1255 613 270 4667 T
03 4667 231 742 746 A
04 4667 72 93 38 A
05 562 1468 410 3199 y
06 424 2114 1059 2552 y
07 439 1816 323 2851 y
08 4667 347 883 305 A
09 4667 165 186 132 A
10 6 51 6 4667 T
11 899 422 97 4667 T
12 4667 126 506 767 A
13 1464 1005 1201 996 r
Binding TFs: CART1_DBD (Homeobox domain, Homeobox KN domain)
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

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