DNA Binding Motif

Accessions: 5h3r_A (3D-footprint 20231221)
Names: Multiple antibiotic resistance protein MarR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of mutant MarR C80S from E.coli complexed with operator DNA
Length: 8
Consensus: AnnTTGCC
Weblogo:
PSSM: P0 A C G T
01 67 9 11 9 A
02 24 24 24 24 n
03 24 24 24 24 n
04 9 9 9 69 T
05 11 9 9 67 T
06 0 0 96 0 G
07 0 96 0 0 C
08 0 96 0 0 C
Binding TFs: 5h3r_A (MarR family, MarR family, Winged helix DNA-binding domain)
Binding Sites: 5h3r_C
5h3r_D
Publications: Zhu R, Hao Z, Lou H, Song Y, Zhao J, Chen Y, Zhu J, Chen PR. Structural characterization of the DNA-binding mechanism underlying the copper(II)-sensing MarR transcriptional regulator. J Biol Inorg Chem 22:685-693 (2017). [Pubmed]

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