DNA Binding Motif

Accessions: MA1408.1 (JASPAR 2024)
Names: FaEOBII
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: rGTTAGGTaw
Weblogo:
PSSM: P0 A C G T
01 45035 6949 26996 21020 r
02 21068 992 73515 4425 G
03 1124 422 9987 88466 T
04 2313 1649 767 95271 T
05 77467 6291 2500 13742 A
06 1296 865 97032 807 G
07 1374 865 91609 6153 G
08 1336 21093 480 77091 T
09 66987 9932 8318 14763 a
10 28881 20021 24969 26129 w
Publications: Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.