DNA Binding Motif

Accessions: MA0296.1 (JASPAR 2018)
Names: FKH1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Notes: PBM
Length: 20
Consensus: ygwwwtGTAAACAAagrrga
Weblogo:
PSSM: P0 A C G T
01 177 287 207 326 y
02 247 192 334 225 g
03 520 84 98 297 w
04 526 76 129 267 w
05 365 73 150 411 w
06 119 146 133 600 t
07 146 4 847 1 G
08 7 3 0 987 T
09 959 37 0 1 A
10 977 11 1 9 A
11 990 1 2 5 A
12 1 925 1 71 C
13 990 1 3 4 A
14 874 39 16 69 A
15 671 49 70 208 a
16 248 191 407 152 g
17 374 158 296 170 r
18 284 184 330 200 r
19 205 116 452 225 g
20 421 192 248 137 a
Binding TFs: P40466 (FHA domain, Fork head domain)
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

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