DNA Binding Motif
| Accessions: | MF0003.1 (JASPAR 2024) |
| Names: | REL class |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | METAMODEL |
| Length: | 10 |
| Consensus: | GGGrwTTYCC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 10.460 79.710 9.830 G 02 0 2.260 90.850 6.890 G 03 1.420 0 93.760 4.820 G 04 29.190 2.260 54.490 14.060 r 05 42.350 16.160 15.200 26.290 w 06 19.440 3.270 4.150 73.140 T 07 1.420 5.500 2.730 90.350 T 08 2.840 27.040 0 70.120 Y 09 2.160 90.670 0 7.170 C 10 4.110 91.170 1.280 3.440 C |
| Publications: | Sandelin A, Wasserman W.W. Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics. Journal of molecular biology 338:207-15 (2004). [Pubmed] |
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