DNA Binding Motif

Accessions: 1dux_F (3D-footprint 20231221)
Names: ETS-DOMAIN PROTEIN ELK-1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT DNA-RECOGNITION
Length: 5
Consensus: tCCGg
Weblogo:
PSSM: P0 A C G T
01 16 13 13 54 t
02 0 96 0 0 C
03 0 96 0 0 C
04 0 0 96 0 G
05 13 13 57 13 g
Binding TFs: 1dux_F (Ets-domain)
Binding Sites: 1dux_D
1dux_E
Publications: Mo Y, Vaessen B, Johnston K, Marmorstein R. Structure of the elk-1-DNA complex reveals how DNA-distal residues affect ETS domain recognition of DNA. Nature structural biology 7:292-7 (2000). [Pubmed]

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