DNA Binding Motif

Accessions: CN0007.1 (JASPAR 2024)
Names: LM7
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 17
Consensus: CCAscAGrkGGCrCTgt
Weblogo:
PSSM: P0 A C G T
01 438 5200 284 380 C
02 29 6234 23 16 C
03 5704 61 222 315 A
04 128 2565 3541 68 s
05 638 3860 265 1539 c
06 6120 32 64 86 A
07 35 13 6237 17 G
08 3391 70 2822 19 r
09 102 57 2514 3629 k
10 47 18 6211 26 G
11 66 120 5594 522 G
12 546 4695 160 901 C
13 2799 76 3222 205 r
14 447 4489 1263 103 C
15 438 922 140 4802 T
16 1397 1536 3204 165 g
17 798 1304 925 3275 t
Publications: Xie X, Mikkelsen T.S, Gnirke A, Lindblad-Toh K, Kellis M, Lander E.S. Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites. Proceedings of the National Academy of Sciences of the United States of America 104:7145-50 (2007). [Pubmed]

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