DNA Binding Motif

Accessions: MA1412.1 (JASPAR 2024)
Names: TSAR2
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: yGCRCGYGCr
Weblogo:
PSSM: P0 A C G T
01 17675 28815 22859 30652 y
02 2687 2274 94487 552 G
03 1998 97506 139 358 C
04 72496 128 26792 585 R
05 392 95417 60 4131 C
06 4131 60 95417 392 G
07 585 26792 128 72496 Y
08 358 139 97506 1998 G
09 552 94487 2274 2687 C
10 26626 19532 32839 21003 r
Publications: Huq E., Al-Sady B., Hudson M., Kim C., Apel K., Quail P. H. Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.. Science 305:1937-1941 (2004). [Pubmed]

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