DNA Binding Motif
| Accessions: | Rel (DrosophilaTF 1.1) |
| Names: | Rel |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] |
| Length: | 11 |
| Consensus: | GGGGAwtCmCc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.06 0.13 0.71 0.1 G 02 0 0 1 0 G 03 0 0 1 0 G 04 0 0 1 0 G 05 1 0 0 0 A 06 0.55 0.1 0.03 0.32 w 07 0.06 0.2 0.16 0.58 t 08 0.03 0.81 0 0.16 C 09 0.48 0.52 0 0 m 10 0 0.94 0 0.06 C 11 0.19 0.39 0.23 0.19 c |
| Binding TFs: | Rel (Ankyrin repeat, Rel homology domain (RHD), Ankyrin repeats (3 copies), Ankyrin repeat, Ankyrin repeats (many copies)) |
| Binding Sites: | Rel_1 Rel_10 Rel_11 Rel_12 Rel_13 Rel_14 Rel_15 Rel_16 Rel_17 Rel_18 Rel_19 Rel_2 Rel_20 Rel_21 Rel_22 Rel_23 Rel_24 Rel_25 Rel_26 Rel_27 Rel_28 Rel_29 Rel_3 Rel_30 Rel_31 Rel_4 Rel_5 Rel_6 Rel_7 Rel_8 Rel_9 |
| Publications: | Senger K, Armstrong G.W, Rowell W.J, Kwan J.M, Markstein M, Levine M. Immunity regulatory DNAs share common organizational features in Drosophila. Molecular cell 13:19-32 (2004). [Pubmed] |
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