DNA Binding Motif
| Accessions: | LexA (RegulonDB 7.5) |
| Names: | LexA |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 20 |
| Consensus: | waCTGtATAwAwawmCAGya |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 16 6 1 14 w 02 24 5 6 2 a 03 0 37 0 0 C 04 1 0 0 36 T 05 0 1 36 0 G 06 5 3 6 23 t 07 30 5 0 2 A 08 2 3 3 29 T 09 29 0 6 2 A 10 15 6 5 11 w 11 32 0 0 5 A 12 17 7 1 12 w 13 22 3 5 7 a 14 15 8 3 11 w 15 21 14 1 1 m 16 1 35 1 0 C 17 34 1 0 2 A 18 4 0 33 0 G 19 2 10 6 19 y 20 19 4 6 8 a |
| Binding TFs: | ECK120005002 (Peptidase S24-like, LexA DNA binding domain) |
| Binding Sites: | ECK120012772 ECK120012774 ECK120012875 ECK120012890 ECK120012898 ECK120012901 ECK120012903 ECK120013419 ECK120013837 ECK120015229 ECK120015620 ECK120015626 ECK120015628 ECK120015705 ECK120015707 ECK120015709 ECK120015711 ECK120015767 ECK120015769 ECK120015969 ECK120016101 ECK120016106 ECK120016145 ECK120019269 ECK120019273 ECK120019275 ECK120033006 ECK120033008 ECK120033346 ECK120048800 ECK120048802 ECK120048804 ECK120048806 ECK120048810 ECK120048812 ECK120048814 ECK120051321 ECK120051386 ECK125108646 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.