DNA Binding Motif

Accessions: M0701 (AthalianaCistrome v4_May2016)
Names: ANAC016.ampDAP, T06474;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CkTGsagmaCAmGbA
Weblogo:
PSSM: P0 A C G T
01 0 593 0 0 C
02 0 0 205 388 k
03 0 0 0 593 T
04 0 0 593 0 G
05 83 196 197 117 s
06 238 101 118 136 a
07 96 116 269 112 g
08 258 160 128 47 m
09 235 90 123 145 a
10 1 566 9 17 C
11 593 0 0 0 A
12 302 291 0 0 m
13 1 0 576 16 G
14 36 181 155 221 b
15 416 117 0 60 A
Binding TFs: T06474 (No apical meristem (NAM) protein)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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