DNA Binding Motif

Accessions: M0673 (AthalianaCistrome v4_May2016)
Names: ANAC013.DAP, T05444;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CTTGsrgarCAAGyaA
Weblogo:
PSSM: P0 A C G T
01 0 598 0 1 C
02 0 0 132 467 T
03 0 0 0 599 T
04 14 0 585 0 G
05 133 151 195 120 s
06 169 113 210 107 r
07 136 109 262 92 g
08 344 70 115 70 a
09 316 40 198 45 r
10 28 492 66 13 C
11 599 0 0 0 A
12 507 90 2 0 A
13 0 0 593 6 G
14 104 164 140 191 y
15 351 121 12 115 a
16 532 9 13 45 A
Binding TFs: T05444 (No apical meristem (NAM) protein)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.