DNA Binding Motif

Accessions: MA0035.3 (JASPAR 2024)
Names: Gata1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: tyCTTATCTsy
Weblogo:
PSSM: P0 A C G T
01 2035 4321 2530 9069 t
02 506 6406 2792 8251 y
03 0 14869 437 2649 C
04 0 697 0 17258 T
05 0 0 0 17955 T
06 17955 0 0 0 A
07 0 0 0 17955 T
08 0 17955 0 0 C
09 2166 0 0 15789 T
10 2502 6166 6687 2600 s
11 1886 5072 1598 9399 y
Type: Heterodimer
Binding TFs: P17679 (GATA zinc finger)
P17679
Binding Sites: MA0035.3.1
MA0035.3.10
MA0035.3.11
MA0035.3.12
MA0035.3.13
MA0035.3.14
MA0035.3.15
MA0035.3.16
MA0035.3.17
MA0035.3.18
MA0035.3.19
MA0035.3.2
MA0035.3.20
MA0035.3.3
MA0035.3.4
MA0035.3.5
MA0035.3.6
MA0035.3.7
MA0035.3.8
MA0035.3.9
Publications: Orkin S.H. GATA-binding transcription factors in hematopoietic cells. Blood 80:575-81 (1992). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.