DNA Binding Motif

Accessions: MA1084.1 (JASPAR 2024)
Names: WRKY38
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: cGTTGACy
Weblogo:
PSSM: P0 A C G T
01 152 672 73 104 c
02 69 28 849 55 G
03 26 30 21 923 T
04 8 23 39 930 T
05 9 16 961 14 G
06 955 17 10 18 A
07 16 951 13 20 C
08 15 679 17 289 y
Type: Heterodimer
Binding TFs: Q8GWF1 (WRKY DNA -binding domain)
Q8GWF1
Publications: Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

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