DNA Binding Motif
| Accessions: | MA0062.2 (JASPAR 2024) |
| Names: | Gabpa |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | CCGGAAGygvc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 32 768 188 1 C 02 70 914 4 1 C 03 0 0 990 1 G 04 0 0 991 0 G 05 991 1 1 0 A 06 989 2 0 2 A 07 94 32 866 0 G 08 56 261 37 637 y 09 154 137 603 96 g 10 264 262 415 49 v 11 233 357 224 176 c |
| Type: | Heterodimer |
| Binding TFs: | Q91YY8 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain) Q91YY8 |
| Binding Sites: | MA0062.2.1 MA0062.2.10 MA0062.2.11 MA0062.2.12 MA0062.2.13 MA0062.2.14 MA0062.2.15 MA0062.2.16 MA0062.2.17 MA0062.2.18 MA0062.2.19 MA0062.2.2 MA0062.2.20 MA0062.2.3 MA0062.2.4 MA0062.2.5 MA0062.2.6 MA0062.2.7 MA0062.2.8 MA0062.2.9 |
| Publications: | Valouev A, Johnson D.S, Sundquist A, Medina C, Anton E, Batzoglou S, Myers R.M, Sidow A. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nature methods 5:829-34 (2008). [Pubmed] |
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